Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | PLIM_RS22355 | P54148 | + | 883699 - 887751 | 147138.0 |
| hd domain-containing phosphohydrolase | PLIM_RS03620 | Q9KSB1 | + | 887802 - 888815 | 37824.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PLIM_RS03625 | P96613 | - | 888892 - 890334 | 52202.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PLIM_RS03630 | Q8R9G2 | - | 890489 - 892144 | 59627.6 |
| atp-binding cassette domain-containing protein | PLIM_RS03635 | Q50968 | + | 892545 - 895079 | 93211.0 |
| type i glutamate--ammonia ligase | PLIM_RS03640 | P28605 | + | 895303 - 896715 | 53197.0 |
| heat repeat domain-containing protein | PLIM_RS03645 | Not Available | + | 897751 - 900906 | 117103.0 |
| duf11 domain-containing protein | PLIM_RS03650 | Not Available | - | 901190 - 904045 | 100163.0 |
| helix-turn-helix domain-containing protein | PLIM_RS22360 | Not Available | + | 904718 - 906166 | 51624.8 |
| tigr00730 family rossman fold protein | PLIM_RS03660 | P48636 | + | 906355 - 906936 | 21307.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.