Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | PLIM_RS03460 | Q9SE42 | + | 840941 - 841645 | 25126.4 |
| histidine phosphatase family protein | PLIM_RS22330 | Not Available | + | 841651 - 842451 | 28581.2 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | PLIM_RS03475 | Q7UHX0 | + | 842732 - 843589 | 31258.9 |
| sulfatase | PLIM_RS03480 | Not Available | - | 843674 - 845383 | 62835.6 |
| hypothetical protein | PLIM_RS03485 | Not Available | + | 845428 - 845652 | 7771.05 |
| putative sugar nucleotidyl transferase | PLIM_RS03490 | Not Available | - | 845843 - 847138 | 47950.0 |
| nuclear transport factor 2 family protein | PLIM_RS22335 | Not Available | + | 847463 - 848596 | 40371.5 |
| hypothetical protein | PLIM_RS03500 | Not Available | + | 848734 - 850788 | 72726.1 |
| tetratricopeptide repeat protein | PLIM_RS03505 | Not Available | - | 850828 - 852747 | 71697.8 |
| class i sam-dependent methyltransferase | PLIM_RS22345 | Not Available | + | 853035 - 853706 | 25715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.