Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | PLIM_RS00045 | Not Available | + | 7544 - 8851 | 47815.9 |
| ferredoxin family protein | PLIM_RS24930 | P00215 | - | 8976 - 9230 | 9404.2 |
| protein kinase domain-containing protein | PLIM_RS22080 | O64629 | + | 9309 - 10766 | 54424.1 |
| d-alanine--d-alanine ligase | PLIM_RS00055 | A1WYU0 | - | 10824 - 11840 | 37545.6 |
| hypothetical protein | PLIM_RS00060 | Not Available | - | 11910 - 13304 | 49024.1 |
| udp-n-acetylmuramate dehydrogenase | PLIM_RS00065 | A7FYX2 | - | 13644 - 14522 | 31333.6 |
| udp-n-acetylmuramate--l-alanine ligase | PLIM_RS00070 | Q24ZG1 | - | 14413 - 16122 | 62082.4 |
| metalloregulator arsr/smtb family transcription factor | PLIM_RS00075 | Not Available | + | 16614 - 16946 | 12286.2 |
| fad-dependent thymidylate synthase | PLIM_RS00080 | Q5FG35 | + | 17043 - 17984 | 35880.8 |
| hd domain-containing protein | PLIM_RS00085 | P39651 | + | 18212 - 19546 | 50737.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.