Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | PLIM_RS03395 | Not Available | - | 823825 - 824976 | 42766.0 |
| o-antigen ligase | PLIM_RS23570 | Not Available | - | 825036 - 826373 | 48909.5 |
| lipopolysaccharide biosynthesis protein | PLIM_RS03415 | Not Available | - | 826415 - 827791 | 49555.3 |
| aminotransferase class v-fold plp-dependent enzyme | PLIM_RS03420 | Q9K7A0 | - | 827865 - 828998 | 40599.9 |
| hypothetical protein | PLIM_RS24510 | Not Available | - | 829332 - 834032 | 167546.0 |
| duf3299 domain-containing protein | PLIM_RS03430 | Not Available | + | 835115 - 835981 | 30470.9 |
| hypothetical protein | PLIM_RS22325 | Not Available | + | 836210 - 837217 | 36409.8 |
| hypothetical protein | PLIM_RS03445 | Not Available | + | 837309 - 838571 | 47642.4 |
| hd domain-containing protein | PLIM_RS03450 | Q5UQN4 | - | 838699 - 839289 | 21417.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | PLIM_RS03455 | P00362 | + | 839690 - 840712 | 36375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.