Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS24340 | Not Available | - | 815030 - 815191 | 5756.57 |
| marr family winged helix-turn-helix transcriptional regulator | PLIM_RS03350 | Not Available | + | 815190 - 815663 | 18101.1 |
| pirin family protein | PLIM_RS03355 | P73623 | + | 815772 - 816470 | 26526.1 |
| doxx family protein | PLIM_RS03360 | Not Available | + | 816600 - 817022 | 14979.0 |
| rlua family pseudouridine synthase | PLIM_RS03365 | Not Available | - | 817124 - 817933 | 29763.9 |
| prenyltransferase/squalene oxidase repeat-containing protein | PLIM_RS03370 | Not Available | - | 817933 - 820152 | 79471.8 |
| sugar transferase | PLIM_RS03375 | Q0P9D0 | - | 820261 - 820851 | 22177.2 |
| nad(p)-dependent oxidoreductase | PLIM_RS03380 | Not Available | - | 820895 - 821935 | 37142.8 |
| glycosyltransferase family 4 protein | PLIM_RS03385 | Q0P9C9 | - | 821935 - 823101 | 43342.5 |
| class i sam-dependent methyltransferase | PLIM_RS03390 | Not Available | - | 823103 - 823789 | 25628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.