Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide kinase inaa family protein | PLIM_RS03295 | Not Available | + | 797436 - 799250 | 68756.5 |
| duf1570 domain-containing protein | PLIM_RS03300 | Not Available | + | 799247 - 800224 | 37183.9 |
| hypothetical protein | PLIM_RS03305 | Not Available | + | 800508 - 801689 | 43137.6 |
| hypothetical protein | PLIM_RS03310 | Not Available | - | 801992 - 802651 | 23701.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | PLIM_RS03315 | Q6FYD4 | - | 802893 - 804146 | 43694.1 |
| 2-oxoglutarate dehydrogenase e1 component | PLIM_RS03320 | P20707 | - | 804348 - 807134 | 105391.0 |
| comec/rec2 family competence protein | PLIM_RS03330 | Not Available | + | 808006 - 809091 | 39270.0 |
| pilz domain-containing protein | PLIM_RS03335 | Not Available | + | 809413 - 809829 | 15517.3 |
| hsp70 family protein | PLIM_RS03340 | B5XHZ0 | - | 809897 - 812782 | 106146.0 |
| family 16 glycoside hydrolase | PLIM_RS03345 | Not Available | + | 813094 - 814770 | 61598.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.