Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS03245 | Not Available | - | 785409 - 787055 | 53652.3 |
| sgcj/ecac family oxidoreductase | PLIM_RS03250 | Not Available | - | 787138 - 788094 | 34533.0 |
| dmt family transporter | PLIM_RS03255 | Not Available | + | 788501 - 789406 | 32831.6 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PLIM_RS03260 | Q7UWC8 | - | 789857 - 791014 | 42203.3 |
| plp-dependent aspartate aminotransferase family protein | PLIM_RS03265 | P56069 | - | 791119 - 792267 | 41756.8 |
| dctp deaminase | PLIM_RS03270 | B0SH49 | - | 792524 - 793135 | 23574.1 |
| endonuclease iii | PLIM_RS03275 | P73715 | - | 793275 - 794135 | 31472.3 |
| duf58 domain-containing protein | PLIM_RS03280 | Not Available | - | 794216 - 795526 | 49432.0 |
| moxr family atpase | PLIM_RS03285 | Not Available | - | 795523 - 796482 | 35312.7 |
| hypothetical protein | PLIM_RS03290 | Not Available | + | 796879 - 797238 | 13032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.