Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ef-p lysine aminoacylase epma | PLIM_RS03170 | P57824 | - | 770137 - 771189 | 39059.7 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS03175 | Not Available | - | 771222 - 772547 | 47372.3 |
| iron-containing alcohol dehydrogenase | PLIM_RS03180 | P76553 | - | 772713 - 773894 | 42173.7 |
| spoiid/lytb domain-containing protein | PLIM_RS03185 | Not Available | - | 773951 - 775369 | 51086.5 |
| dna-directed rna polymerase subunit alpha c-terminal domain-containing protein | PLIM_RS03195 | O83242 | - | 775627 - 776982 | 49701.1 |
| atp-dependent clp protease atp-binding subunit | PLIM_RS03205 | Q8EU05 | - | 777768 - 780326 | 94988.0 |
| thiamine phosphate synthase | PLIM_RS03215 | Q7NNK8 | + | 780740 - 782350 | 59051.6 |
| hypothetical protein | PLIM_RS03220 | Not Available | + | 782564 - 783160 | 22436.4 |
| gdsl-type esterase/lipase family protein | PLIM_RS22320 | Not Available | + | 783439 - 784380 | 34168.6 |
| Trna-gln | Not Available | Not Available | + | 784351 - 784421 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.