Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spy/cpxp family protein refolding chaperone | PLIM_RS02955 | Not Available | - | 693482 - 694258 | 28100.1 |
| tetr/acrr family transcriptional regulator | PLIM_RS02960 | Not Available | + | 694605 - 695327 | 27440.0 |
| efflux rnd transporter periplasmic adaptor subunit | PLIM_RS02965 | Not Available | + | 695399 - 696940 | 55304.8 |
| efflux rnd transporter permease subunit | PLIM_RS02970 | P25197 | + | 696937 - 700125 | 117575.0 |
| coa-binding protein | PLIM_RS02975 | Not Available | - | 700170 - 700559 | 13760.7 |
| putative metallopeptidase | PLIM_RS02980 | Not Available | - | 700600 - 701190 | 23258.2 |
| adenosine kinase | PLIM_RS02985 | Q55480 | - | 701359 - 702345 | 34814.5 |
| hd-gyp domain-containing protein | PLIM_RS02990 | Not Available | + | 702670 - 704010 | 49178.8 |
| glycosyltransferase family 39 protein | PLIM_RS02995 | Not Available | - | 704086 - 706101 | 73729.4 |
| hypothetical protein | PLIM_RS03000 | Not Available | - | 706253 - 708322 | 77112.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.