Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | PLIM_RS02905 | Q52996 | + | 682342 - 682698 | 12658.0 |
| rna polymerase sigma factor | PLIM_RS02910 | Not Available | + | 682757 - 684046 | 47617.1 |
| duf1559 domain-containing protein | PLIM_RS02915 | Not Available | - | 684100 - 685176 | 37672.0 |
| flagellar basal body rod protein-like protein | PLIM_RS22305 | Not Available | + | 685561 - 687126 | 56673.7 |
| ribosome small subunit-dependent gtpase a | PLIM_RS02925 | Q7UUZ6 | + | 687193 - 688320 | 42039.8 |
| hypothetical protein | PLIM_RS02930 | Not Available | - | 688359 - 689054 | 26090.7 |
| sugar phosphate isomerase/epimerase | PLIM_RS02935 | Not Available | - | 689057 - 690025 | 34904.8 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | PLIM_RS02940 | A6Q4Z6 | - | 690143 - 691192 | 37556.4 |
| hypothetical protein | PLIM_RS02945 | Not Available | + | 691260 - 691550 | 10615.4 |
| hypothetical protein | PLIM_RS02950 | Not Available | - | 691883 - 693067 | 40039.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.