Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS22045 | Not Available | + | 34201 - 34812 | 22537.6 |
| hypothetical protein | PLIM_RS22050 | Not Available | + | 34943 - 35380 | 17554.2 |
| hypothetical protein | PLIM_RS22055 | Not Available | + | 35384 - 35659 | 9837.01 |
| hypothetical protein | PLIM_RS24485 | Not Available | - | 35656 - 35829 | 6585.98 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS22060 | Not Available | - | 35958 - 36233 | 10413.8 |
| host-nuclease inhibitor gam family protein | PLIM_RS22065 | Not Available | + | 36330 - 36944 | 23059.0 |
| chromosomal replication initiator protein dnaa | PLIM_RS22070 | A3DHZ4 | + | 614 - 3166 | 92673.0 |
| hamp domain-containing sensor histidine kinase | PLIM_RS22075 | Q9HV31 | - | 3189 - 4967 | 65464.7 |
| response regulator transcription factor | PLIM_RS00025 | I1WSZ4 | - | 5023 - 5730 | 26511.6 |
| ob-fold trna/helicase-type nucleic acid binding-protein | PLIM_RS24310 | Not Available | - | 6006 - 7139 | 39487.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.