Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 638950 - 640485 | Not Available |
| cyanophycinase | PLIM_RS02750 | Not Available | + | 640871 - 641842 | 35416.5 |
| helix-turn-helix domain-containing protein | PLIM_RS02755 | Not Available | - | 642041 - 642898 | 33286.0 |
| duf1553 domain-containing protein | PLIM_RS02760 | Not Available | + | 642920 - 646111 | 120661.0 |
| duf1501 domain-containing protein | PLIM_RS02765 | Not Available | + | 646118 - 647575 | 53550.9 |
| cyclic-phosphate processing receiver domain-containing protein | PLIM_RS02770 | Not Available | + | 647903 - 648262 | 13568.8 |
| hypothetical protein | PLIM_RS23995 | Not Available | + | 648507 - 648866 | 13498.2 |
| vwa domain-containing protein | PLIM_RS02785 | P9WKN0 | - | 649497 - 650645 | 43432.6 |
| duf1549 and duf1553 domain-containing protein | PLIM_RS02790 | Not Available | + | 651219 - 653099 | 69956.9 |
| duf1501 domain-containing protein | PLIM_RS02795 | Not Available | + | 653217 - 654536 | 46987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.