Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS02635 | Not Available | - | 622820 - 624886 | 73766.1 |
| trove domain-containing protein | PLIM_RS02640 | Not Available | - | 625116 - 626753 | 59492.5 |
| four helix bundle protein | PLIM_RS24940 | Not Available | + | 626838 - 627185 | 12989.7 |
| rna ligase (atp) | PLIM_RS02650 | Not Available | - | 627713 - 628813 | 40725.6 |
| endonuclease v | PLIM_RS24945 | Not Available | - | 629223 - 629753 | 19016.8 |
| Trna-arg | Not Available | Not Available | + | 630154 - 630228 | Not Available |
| Trna-leu | Not Available | Not Available | + | 630479 - 630552 | Not Available |
| Trna-leu | Not Available | Not Available | + | 630849 - 630924 | Not Available |
| Trna-asp | Not Available | Not Available | + | 631004 - 631078 | Not Available |
| Trna-val | Not Available | Not Available | + | 631171 - 631243 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.