Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s5 | PLIM_RS02585 | Q7UN03 | + | 613969 - 614448 | 17010.9 |
| 50s ribosomal protein l15 | PLIM_RS02590 | Q7UN02 | + | 614451 - 614900 | 15851.3 |
| preprotein translocase subunit secy | PLIM_RS02595 | P0A5Z3 | + | 615058 - 616428 | 49792.2 |
| 50s ribosomal protein l36 | PLIM_RS23545 | B3WAJ5 | + | 616600 - 616716 | 4572.84 |
| 30s ribosomal protein s13 | PLIM_RS02600 | Q7UIC7 | + | 616868 - 617254 | 14877.1 |
| 30s ribosomal protein s11 | PLIM_RS02605 | Q7UIC6 | + | 617356 - 617736 | 13630.5 |
| dna-directed rna polymerase subunit alpha | PLIM_RS02610 | Q7UIC5 | + | 617866 - 618876 | 37547.3 |
| bl17 family ribosomal protein | PLIM_RS02615 | Q7UIC4 | + | 618966 - 619583 | 23082.8 |
| heat repeat domain-containing protein | PLIM_RS02620 | Not Available | + | 620050 - 621729 | 62525.8 |
| duf4126 domain-containing protein | PLIM_RS02630 | Not Available | - | 622022 - 622729 | 24899.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.