Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l16 | PLIM_RS02535 | Q7UN13 | + | 609781 - 610200 | 15546.2 |
| 50s ribosomal protein l29 | PLIM_RS02540 | Not Available | + | 610259 - 610459 | 7657.41 |
| 30s ribosomal protein s17 | PLIM_RS02545 | Q7UN11 | + | 610495 - 610758 | 9759.85 |
| 50s ribosomal protein l14 | PLIM_RS02550 | Q7UN10 | + | 610821 - 611189 | 13147.2 |
| 50s ribosomal protein l24 | PLIM_RS02555 | Q7UN09 | + | 611191 - 611547 | 12670.5 |
| 50s ribosomal protein l5 | PLIM_RS02560 | A7HBN0 | + | 611611 - 612153 | 20333.1 |
| type z 30s ribosomal protein s14 | PLIM_RS02565 | Q7UN07 | + | 612203 - 612388 | 6942.65 |
| 30s ribosomal protein s8 | PLIM_RS02570 | Q7UN06 | + | 612425 - 612820 | 14486.7 |
| 50s ribosomal protein l6 | PLIM_RS02575 | Q6A6P1 | + | 612908 - 613444 | 19042.3 |
| 50s ribosomal protein l18 | PLIM_RS02580 | Q2RQX6 | + | 613519 - 613881 | 13012.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.