Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i polyketide synthase | PLIM_RS22275 | A0A1B3PEI6 | - | 580597 - 587832 | 259023.0 |
| pfad family polyunsaturated fatty acid/polyketide biosynthesis protein | PLIM_RS02435 | A0A1B3PEI9 | - | 587912 - 589540 | 59625.6 |
| hypothetical protein | PLIM_RS02445 | Not Available | - | 590411 - 590782 | 13353.9 |
| type iii polyketide synthase | PLIM_RS02450 | Q7U064 | - | 590987 - 592135 | 41872.2 |
| cerr family c-terminal domain-containing protein | PLIM_RS02455 | Not Available | + | 592658 - 593317 | 24769.0 |
| abc transporter permease | PLIM_RS02460 | Not Available | + | 593386 - 594546 | 42807.8 |
| abc transporter atp-binding protein | PLIM_RS02465 | P9WQK4 | + | 594709 - 595503 | 28746.9 |
| hlyd family secretion protein | PLIM_RS02470 | Not Available | + | 595503 - 596747 | 45653.8 |
| dna-directed rna polymerase subunit beta' | PLIM_RS02475 | Q7URW4 | + | 597053 - 601336 | 159020.0 |
| 30s ribosomal protein s12 | PLIM_RS02480 | B5RLU7 | + | 601658 - 602029 | 13887.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.