Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | + | 565017 - 565089 | Not Available |
| yggs family pyridoxal phosphate-dependent enzyme | PLIM_RS02375 | O31727 | + | 565385 - 566248 | 31349.7 |
| hypothetical protein | PLIM_RS02380 | Not Available | - | 566324 - 566875 | 20626.3 |
| rna polymerase sigma factor | PLIM_RS02385 | Not Available | - | 566865 - 567509 | 24384.3 |
| hypothetical protein | PLIM_RS02390 | Not Available | - | 567574 - 568422 | 30754.0 |
| inverse autotransporter beta-barrel domain-containing protein | PLIM_RS02395 | Not Available | - | 568788 - 576635 | 265678.0 |
| hypothetical protein | PLIM_RS02400 | Not Available | - | 577341 - 577874 | 18789.3 |
| response regulator | PLIM_RS24665 | Q55169 | - | 578087 - 578842 | 28478.9 |
| yran family protein | PLIM_RS02415 | Q74FF9 | + | 579194 - 579739 | 21100.5 |
| hypothetical protein | PLIM_RS02420 | Not Available | - | 579779 - 580183 | 15357.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.