Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | PLIM_RS02320 | Not Available | + | 549570 - 550082 | 17628.6 |
| 50s ribosomal protein l7/l12 | PLIM_RS02325 | Q0ANP2 | + | 550232 - 550624 | 13287.0 |
| dna-directed rna polymerase subunit beta | PLIM_RS02330 | Q7URW6 | + | 551257 - 554973 | 139410.0 |
| fused dsp-ptpase phosphatase/nad kinase-like protein | PLIM_RS02335 | Not Available | - | 555433 - 556161 | 26868.1 |
| glycosyltransferase family 2 protein | PLIM_RS02340 | Not Available | - | 556296 - 557300 | 36975.6 |
| cardiolipin synthase | PLIM_RS02345 | O66043 | - | 557540 - 558973 | 54575.9 |
| exea family protein | PLIM_RS02350 | Not Available | - | 559141 - 559974 | 31028.2 |
| hypothetical protein | PLIM_RS02355 | Not Available | - | 560210 - 560530 | 11815.2 |
| dna gyrase subunit b | PLIM_RS02360 | Q9PKK3 | + | 561032 - 563506 | 91722.0 |
| ribose-phosphate pyrophosphokinase | PLIM_RS02365 | Q8KCQ2 | + | 563754 - 564770 | 36997.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.