Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | + | 544387 - 544468 | Not Available |
| Trna-gly | Not Available | Not Available | + | 544502 - 544572 | Not Available |
| Trna-thr | Not Available | Not Available | + | 544734 - 544806 | Not Available |
| elongation factor tu | PLIM_RS02285 | Q7UMZ0 | + | 545039 - 546235 | 43253.3 |
| 50s ribosomal protein l33 | PLIM_RS23540 | Q0SNB1 | + | 546408 - 546563 | 6297.66 |
| Trna-trp | Not Available | Not Available | + | 546621 - 546693 | Not Available |
| preprotein translocase subunit sece | PLIM_RS02300 | Not Available | + | 546997 - 547371 | 13916.3 |
| transcription termination/antitermination protein nusg | PLIM_RS02305 | Q8DD25 | + | 547576 - 548190 | 22697.1 |
| 50s ribosomal protein l11 | PLIM_RS02310 | P29395 | + | 548258 - 548692 | 15099.5 |
| 50s ribosomal protein l1 | PLIM_RS02315 | Q84IF4 | + | 548855 - 549466 | 21713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.