Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gspe/pule family protein | PLIM_RS02215 | Not Available | - | 530461 - 532194 | 64001.0 |
| stas domain-containing protein | PLIM_RS02220 | Not Available | - | 532246 - 532584 | 12534.8 |
| response regulator | PLIM_RS02225 | Q54SP4 | - | 532644 - 533066 | 15701.1 |
| cell wall metabolism sensor histidine kinase walk | PLIM_RS02230 | P35164 | - | 533134 - 534882 | 64340.3 |
| exodeoxyribonuclease vii large subunit | PLIM_RS02235 | Q7UTZ9 | - | 535262 - 536491 | 44799.5 |
| lipopolysaccharide assembly protein lapb | PLIM_RS02240 | Not Available | - | 536619 - 538466 | 65335.6 |
| glycosyltransferase family 39 protein | PLIM_RS02245 | O67270 | + | 539039 - 540874 | 68460.9 |
| hypothetical protein | PLIM_RS02250 | Not Available | - | 540880 - 541908 | 39110.3 |
| signal peptidase i | PLIM_RS22270 | Not Available | + | 542041 - 543816 | 66240.3 |
| Trna-thr | Not Available | Not Available | + | 544299 - 544370 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.