Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS02155 | Not Available | - | 521636 - 521866 | 8561.29 |
| phage holin family protein | PLIM_RS02160 | Not Available | - | 521966 - 522421 | 16723.4 |
| hypothetical protein | PLIM_RS02170 | Not Available | - | 522714 - 523187 | 17849.0 |
| csbd family protein | PLIM_RS02175 | Not Available | - | 523298 - 523723 | 15274.1 |
| duf1328 domain-containing protein | PLIM_RS23535 | Not Available | - | 523827 - 523997 | 5932.82 |
| hypothetical protein | PLIM_RS02190 | Not Available | + | 524885 - 525103 | 8609.24 |
| bifunctional oligoribonuclease/pap phosphatase nrna | PLIM_RS02195 | Not Available | + | 525192 - 526313 | 40201.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PLIM_RS02200 | Not Available | + | 526434 - 527153 | 25558.4 |
| cytochrome b n-terminal domain-containing protein | PLIM_RS02205 | Q59297 | + | 527253 - 529085 | 67017.9 |
| type ii secretion system f family protein | PLIM_RS02210 | Q5SK58 | - | 529103 - 530305 | 43010.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.