Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tfp pilus assembly protein fimt/fimu | PLIM_RS02090 | Not Available | - | 507055 - 508137 | 39220.8 |
| hypothetical protein | PLIM_RS02095 | Not Available | - | 508162 - 509274 | 40670.2 |
| type ii secretion system protein | PLIM_RS02100 | Not Available | - | 509364 - 510422 | 37418.9 |
| type ii secretion system f family protein | PLIM_RS02110 | Q1D0A0 | - | 510626 - 511885 | 46140.4 |
| gspe/pule family protein | PLIM_RS02115 | Not Available | - | 512038 - 513750 | 63202.1 |
| type iv pilus twitching motility protein pilt | PLIM_RS02120 | P24559 | - | 513912 - 515024 | 41337.8 |
| gspe/pule family protein | PLIM_RS02130 | Not Available | - | 515847 - 517544 | 62394.4 |
| hypothetical protein | PLIM_RS02140 | Not Available | - | 518054 - 518272 | 7754.12 |
| duf4112 domain-containing protein | PLIM_RS02145 | Not Available | + | 518760 - 519290 | 19332.6 |
| alpha-amylase family glycosyl hydrolase | PLIM_RS02150 | A1U0K1 | + | 519606 - 521519 | 71909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.