Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yfho family protein | PLIM_RS02045 | Not Available | + | 490046 - 492220 | 80538.6 |
| nad-dependent epimerase/dehydratase family protein | PLIM_RS22260 | Not Available | - | 492345 - 493217 | 31127.0 |
| hypothetical protein | PLIM_RS02055 | Not Available | - | 493281 - 494420 | 41161.5 |
| hypothetical protein | PLIM_RS02060 | Not Available | + | 494763 - 496019 | 43771.2 |
| hypothetical protein | PLIM_RS02065 | Not Available | + | 496234 - 497019 | 28332.7 |
| duf11 domain-containing protein | PLIM_RS02070 | Not Available | + | 497094 - 498494 | 50010.2 |
| hypothetical protein | PLIM_RS24330 | Not Available | + | 498560 - 498727 | 5971.88 |
| hypothetical protein | PLIM_RS02075 | Not Available | - | 498927 - 503726 | 175222.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PLIM_RS02080 | Not Available | - | 503951 - 505651 | 61240.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PLIM_RS02085 | Not Available | - | 505652 - 507058 | 50248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.