Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease iv | PLIM_RS01985 | Q74FS7 | - | 478701 - 479570 | 31855.9 |
| hypothetical protein | PLIM_RS01990 | Not Available | + | 479689 - 480519 | 30503.1 |
| outer membrane beta-barrel protein | PLIM_RS01995 | Not Available | + | 480879 - 482213 | 49090.2 |
| hypothetical protein | PLIM_RS02005 | Not Available | + | 482576 - 483163 | 22413.2 |
| hypothetical protein | PLIM_RS02010 | Not Available | - | 483199 - 484242 | 39201.3 |
| hypothetical protein | PLIM_RS02015 | Not Available | - | 484343 - 485515 | 43322.7 |
| hypothetical protein | PLIM_RS02020 | Not Available | + | 485745 - 486434 | 26599.8 |
| sugar phosphate isomerase/epimerase | PLIM_RS02025 | P73599 | + | 486503 - 487342 | 31224.4 |
| duf1559 domain-containing protein | PLIM_RS02035 | Not Available | - | 487705 - 488721 | 37788.8 |
| mrp/nbp35 family atp-binding protein | PLIM_RS02040 | P53383 | + | 488915 - 489979 | 37246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.