Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | PLIM_RS01925 | P13800 | - | 462590 - 463252 | 23941.1 |
| histidine kinase | PLIM_RS01930 | Not Available | - | 463283 - 465394 | 78914.7 |
| duf1559 domain-containing protein | PLIM_RS01935 | Not Available | + | 465575 - 466564 | 35735.5 |
| signal peptide-containing protein | PLIM_RS01940 | Not Available | + | 466906 - 467337 | 15137.0 |
| duf1559 domain-containing protein | PLIM_RS01945 | Not Available | - | 467492 - 468541 | 37562.2 |
| duf1553 domain-containing protein | PLIM_RS01950 | Not Available | - | 468753 - 471956 | 119552.0 |
| 30s ribosomal protein s15 | PLIM_RS01955 | Q5FQM0 | + | 472404 - 472673 | 10408.7 |
| polyribonucleotide nucleotidyltransferase | PLIM_RS01965 | Q7UR95 | + | 473382 - 475493 | 75837.4 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS01970 | P38023 | - | 475774 - 477435 | 64604.5 |
| gnat family n-acetyltransferase | PLIM_RS01980 | P59620 | - | 478131 - 478580 | 16465.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.