Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heat repeat domain-containing protein | PLIM_RS21710 | Not Available | - | 5399686 - 5401956 | 79915.0 |
| hypothetical protein | PLIM_RS21715 | Not Available | + | 5402557 - 5403039 | 17508.9 |
| m20/m25/m40 family metallo-hydrolase | PLIM_RS21720 | B4F192 | - | 5403072 - 5404265 | 43331.5 |
| prolyl oligopeptidase family serine peptidase | PLIM_RS21725 | Not Available | - | 5404402 - 5405208 | 29505.7 |
| hypothetical protein | PLIM_RS21730 | Not Available | + | 5405442 - 5407358 | 70486.3 |
| 4a-hydroxytetrahydrobiopterin dehydratase | PLIM_RS21735 | Q6QJ72 | - | 5407410 - 5407829 | 15554.5 |
| hypothetical protein | PLIM_RS23445 | Not Available | - | 5408190 - 5408639 | 15513.5 |
| duf1559 domain-containing protein | PLIM_RS21745 | Not Available | - | 5408786 - 5409727 | 33226.1 |
| duf1501 domain-containing protein | PLIM_RS21750 | Not Available | - | 5410101 - 5411336 | 45390.8 |
| duf1800 domain-containing protein | PLIM_RS21755 | Not Available | - | 5411388 - 5413013 | 60579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.