Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PLIM_RS21605 | Not Available | + | 5379088 - 5382093 | 112945.0 |
| thioredoxin-dependent thiol peroxidase | PLIM_RS21610 | Q83CY8 | - | 5382418 - 5382900 | 17504.0 |
| hypothetical protein | PLIM_RS21615 | Not Available | - | 5382998 - 5383780 | 29211.5 |
| anti-sigma factor | PLIM_RS21620 | Not Available | + | 5384165 - 5384719 | 20174.8 |
| hypothetical protein | PLIM_RS21625 | Not Available | + | 5384716 - 5385837 | 42088.9 |
| fad-binding oxidoreductase | PLIM_RS21630 | Not Available | + | 5385967 - 5387079 | 41613.3 |
| hypothetical protein | PLIM_RS21635 | Not Available | + | 5387136 - 5387315 | 6414.75 |
| duf3472 domain-containing protein | PLIM_RS21640 | Not Available | - | 5387483 - 5388529 | 38349.8 |
| hypothetical protein | PLIM_RS23435 | Not Available | + | 5389126 - 5389812 | 25394.6 |
| hypothetical protein | PLIM_RS21655 | Not Available | - | 5389977 - 5391218 | 45687.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.