Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sorbosone dehydrogenase family protein | PLIM_RS01875 | Q6UWX4 | - | 449252 - 450520 | 46562.9 |
| sdr family oxidoreductase | PLIM_RS01880 | B8N0E8 | - | 450865 - 452346 | 54939.1 |
| app1 family protein | PLIM_RS22255 | Q9HGP1 | + | 453117 - 454181 | 40405.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | PLIM_RS01890 | Not Available | + | 454184 - 456394 | 82554.1 |
| hypothetical protein | PLIM_RS01895 | Not Available | + | 456543 - 457052 | 19116.8 |
| dead/deah box helicase | PLIM_RS01900 | P75093 | + | 457127 - 459151 | 75699.9 |
| phosphoadenylyl-sulfate reductase | PLIM_RS01905 | A0R0W2 | - | 459364 - 460155 | 29405.4 |
| hypothetical protein | PLIM_RS24885 | Not Available | - | 460343 - 460474 | 4840.95 |
| class i sam-dependent methyltransferase | PLIM_RS01915 | A7NAA1 | - | 460798 - 461508 | 27342.2 |
| hypothetical protein | PLIM_RS01920 | Not Available | - | 461818 - 462255 | 16933.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.