Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase family protein | PLIM_RS21555 | Q5L3K8 | + | 5363786 - 5366863 | 113480.0 |
| glycosyltransferase family 4 protein | PLIM_RS21560 | Q58577 | - | 5367167 - 5368294 | 41358.5 |
| hypothetical protein | PLIM_RS21565 | Not Available | + | 5368517 - 5369101 | 21903.2 |
| hypothetical protein | PLIM_RS21570 | Not Available | + | 5369098 - 5369997 | 33249.9 |
| hypothetical protein | PLIM_RS21575 | Not Available | - | 5370020 - 5370955 | 34716.3 |
| sec-c domain-containing protein | PLIM_RS21580 | Not Available | + | 5371616 - 5373775 | 79864.3 |
| hypothetical protein | PLIM_RS21585 | Not Available | - | 5374075 - 5374428 | 13310.9 |
| threonine--trna ligase | PLIM_RS21590 | Q7UJ52 | - | 5374620 - 5376830 | 82622.8 |
| hypothetical protein | PLIM_RS21595 | Not Available | - | 5377205 - 5377789 | 20857.3 |
| sugar phosphate isomerase/epimerase | PLIM_RS21600 | Not Available | + | 5378128 - 5378871 | 27721.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.