Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | PLIM_RS21170 | Q8DKH2 | + | 5283933 - 5285891 | 72688.3 |
| tade/tadg family type iv pilus assembly protein | PLIM_RS23410 | Not Available | - | 5286152 - 5286589 | 15667.7 |
| vwa domain-containing protein | PLIM_RS21180 | Not Available | - | 5286676 - 5287848 | 41520.7 |
| tade family protein | PLIM_RS23415 | Not Available | - | 5287926 - 5288342 | 14496.5 |
| hypothetical protein | PLIM_RS21190 | Not Available | - | 5288748 - 5291141 | 84673.9 |
| hypothetical protein | PLIM_RS24905 | Not Available | + | 5291747 - 5291872 | 5060.15 |
| 6-carboxytetrahydropterin synthase | PLIM_RS21210 | Not Available | + | 5291920 - 5292330 | 15625.9 |
| hypothetical protein | PLIM_RS21215 | Not Available | + | 5292548 - 5293456 | 32133.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | PLIM_RS21220 | Not Available | - | 5293654 - 5296815 | 112758.0 |
| peptidoglycan recognition family protein | PLIM_RS24850 | Not Available | + | 5297402 - 5298436 | 37008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.