Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | PLIM_RS21060 | P94890 | - | 5254773 - 5256071 | 46858.0 |
| thioredoxin-like domain-containing protein | PLIM_RS21070 | Q8VZ10 | + | 5256570 - 5258186 | 58032.0 |
| fad-binding oxidoreductase | PLIM_RS23400 | P52073 | + | 5258275 - 5259582 | 48301.6 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS21080 | Not Available | - | 5259645 - 5260310 | 24611.1 |
| carbohydrate porin | PLIM_RS21085 | Not Available | + | 5260691 - 5262163 | 52886.8 |
| nucleotide sugar dehydrogenase | PLIM_RS21090 | G3XD94 | - | 5262197 - 5263522 | 48710.8 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS21095 | Not Available | + | 5263787 - 5266207 | 89236.0 |
| zinc metallopeptidase | PLIM_RS21100 | O05248 | - | 5266370 - 5267080 | 25347.8 |
| aspartate 1-decarboxylase | PLIM_RS21110 | A0LF66 | + | 5267516 - 5267878 | 13353.2 |
| pmoa family protein | PLIM_RS21115 | Not Available | + | 5268018 - 5268998 | 36758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.