Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rep-associated tyrosine transposase | PLIM_RS01820 | Not Available | - | 434424 - 434972 | 22108.9 |
| pvc-type heme-binding cxxch protein | PLIM_RS01825 | Not Available | + | 435356 - 439528 | 153528.0 |
| arylsulfatase | PLIM_RS01830 | Q8A2H2 | + | 439671 - 441152 | 54974.9 |
| ligase-associated dna damage response endonuclease pdem | PLIM_RS01835 | Not Available | + | 441385 - 442077 | 25587.0 |
| 50s ribosomal protein l21 | PLIM_RS01840 | A1WY50 | - | 442584 - 442925 | 12288.9 |
| rne/rng family ribonuclease | PLIM_RS01845 | P44443 | - | 443034 - 444647 | 61925.2 |
| phosphoenolpyruvate--protein phosphotransferase | PLIM_RS01855 | P42014 | - | 445544 - 447292 | 64512.2 |
| hpr family phosphocarrier protein | PLIM_RS01860 | Not Available | - | 447382 - 447666 | 10186.3 |
| pts sugar transporter subunit iia | PLIM_RS01865 | P30335 | - | 447823 - 448293 | 16898.3 |
| ribosome hibernation-promoting factor, hpf/yfia family | PLIM_RS01870 | Not Available | - | 448589 - 448933 | 12764.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.