Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin family protein | PLIM_RS21010 | P74409 | - | 5242682 - 5244043 | 50155.2 |
| class i sam-dependent methyltransferase | PLIM_RS23390 | Not Available | - | 5244330 - 5245064 | 27660.4 |
| nad(p)h:quinone oxidoreductase | PLIM_RS21020 | C1DFX8 | + | 5245453 - 5246052 | 20641.0 |
| transcriptional regulator nrdr | PLIM_RS21025 | B0TGD0 | - | 5246140 - 5246604 | 18392.0 |
| rna polymerase sigma factor | PLIM_RS23395 | Not Available | + | 5246987 - 5247604 | 23518.0 |
| hypothetical protein | PLIM_RS21035 | Not Available | + | 5247710 - 5248420 | 25711.2 |
| hypothetical protein | PLIM_RS21040 | Not Available | + | 5248490 - 5249386 | 33552.5 |
| duf1549 domain-containing protein | PLIM_RS21045 | Not Available | + | 5249478 - 5252474 | 112308.0 |
| duf1501 domain-containing protein | PLIM_RS21050 | Not Available | + | 5252581 - 5253879 | 46392.4 |
| hypothetical protein | PLIM_RS21055 | Not Available | + | 5253992 - 5254504 | 18347.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.