Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PLIM_RS20850 | Q60270 | - | 5205947 - 5207995 | 74293.7 |
| sir2 family protein | PLIM_RS20855 | Not Available | - | 5208076 - 5209389 | 48915.3 |
| hypothetical protein | PLIM_RS20860 | Not Available | + | 5210242 - 5210529 | 11031.7 |
| dna mismatch repair protein muts | PLIM_RS20865 | Q7UP05 | + | 5210801 - 5213437 | 97833.6 |
| hypothetical protein | PLIM_RS20870 | Not Available | - | 5213698 - 5214135 | 15602.5 |
| hypothetical protein | PLIM_RS23375 | Not Available | - | 5214265 - 5214612 | 13385.9 |
| hypothetical protein | PLIM_RS20880 | Not Available | - | 5214659 - 5215183 | 19963.8 |
| hypothetical protein | PLIM_RS20885 | Not Available | - | 5215304 - 5215624 | 12142.2 |
| duf1559 domain-containing protein | PLIM_RS20890 | Not Available | + | 5216337 - 5217134 | 30535.5 |
| penicillin-binding protein 2 | PLIM_RS20895 | E1WGF1 | - | 5217358 - 5219655 | 85089.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.