Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | PLIM_RS20630 | Not Available | - | 5150568 - 5152010 | 52475.6 |
| hypothetical protein | PLIM_RS20635 | Not Available | + | 5152045 - 5152248 | 7286.98 |
| moxr family atpase | PLIM_RS20640 | P94474 | + | 5152304 - 5153242 | 34326.4 |
| trx7/pdz domain-containing (seleno)protein | PLIM_RS20645 | Not Available | + | 5153429 - 5154775 | 49638.0 |
| glucose 1-dehydrogenase | PLIM_RS20650 | Q0W5A6 | - | 5154851 - 5155957 | 40245.4 |
| hypothetical protein | PLIM_RS20660 | Not Available | + | 5156431 - 5156661 | 7744.7 |
| duf6798 domain-containing protein | PLIM_RS20665 | Not Available | + | 5156865 - 5158517 | 61096.8 |
| hypothetical protein | PLIM_RS20675 | Not Available | + | 5158696 - 5159685 | 35429.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | PLIM_RS20680 | A9KS30 | + | 5159719 - 5160855 | 41235.6 |
| hypothetical protein | PLIM_RS20685 | Not Available | - | 5160916 - 5162205 | 48635.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.