Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS20580 | Not Available | - | 5136462 - 5136905 | 16790.1 |
| class i sam-dependent methyltransferase | PLIM_RS20585 | Not Available | - | 5136963 - 5137679 | 27315.7 |
| vwa domain-containing protein | PLIM_RS20590 | Not Available | - | 5138069 - 5141140 | 112985.0 |
| atp-binding cassette domain-containing protein | PLIM_RS20595 | O83658 | - | 5141232 - 5143151 | 70690.5 |
| hypothetical protein | PLIM_RS20600 | Not Available | - | 5143232 - 5144839 | 59770.4 |
| abc transporter substrate-binding protein | PLIM_RS20605 | Not Available | - | 5144836 - 5145951 | 41078.2 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS20610 | Not Available | - | 5146100 - 5147926 | 65729.5 |
| rrf2 family transcriptional regulator | PLIM_RS23365 | Not Available | - | 5148007 - 5148570 | 20552.7 |
| hypothetical protein | PLIM_RS24275 | Not Available | + | 5148955 - 5149347 | 14780.8 |
| hypothetical protein | PLIM_RS20625 | Not Available | + | 5149505 - 5150233 | 26778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.