Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | PLIM_RS20525 | Not Available | + | 5122188 - 5123105 | 33510.3 |
| cytochrome c oxidase subunit iv family protein | PLIM_RS20530 | Not Available | + | 5123199 - 5123639 | 15890.5 |
| cytochrome c oxidase subunit 3 | PLIM_RS20535 | Not Available | + | 5123848 - 5124411 | 21345.8 |
| glucose-6-phosphate isomerase | PLIM_RS20540 | Q8YY05 | + | 5124589 - 5126190 | 56983.8 |
| ll-diaminopimelate aminotransferase | PLIM_RS20545 | B7KL61 | + | 5126414 - 5127649 | 45024.4 |
| methylenetetrahydrofolate reductase | PLIM_RS20550 | O67422 | + | 5127655 - 5128587 | 34180.8 |
| gtpase domain-containing protein | PLIM_RS20555 | Not Available | - | 5128797 - 5130725 | 71575.0 |
| hypothetical protein | PLIM_RS20565 | Not Available | + | 5131180 - 5133030 | 65979.2 |
| sulfatase | PLIM_RS20570 | Q32KH5 | - | 5133062 - 5134447 | 51353.8 |
| serine/threonine-protein kinase | PLIM_RS20575 | Not Available | - | 5134647 - 5136410 | 65443.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.