Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS20470 | Not Available | - | 5106446 - 5108392 | 73931.2 |
| cytochrome c3 family protein | PLIM_RS20480 | Not Available | + | 5108954 - 5109643 | 25450.7 |
| tat-variant-translocated molybdopterin oxidoreductase | PLIM_RS20485 | Q72E85 | + | 5109845 - 5113144 | 119745.0 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | PLIM_RS20490 | Not Available | + | 5113273 - 5114709 | 54297.3 |
| quinol:electron acceptor oxidoreductase subunit actd | PLIM_RS20495 | Not Available | + | 5114866 - 5116266 | 51287.1 |
| hypothetical protein | PLIM_RS20500 | Not Available | + | 5116391 - 5117644 | 46523.4 |
| hypothetical protein | PLIM_RS20505 | Not Available | + | 5117827 - 5118147 | 11976.5 |
| sco family protein | PLIM_RS20510 | Not Available | + | 5118248 - 5119171 | 33770.8 |
| cytochrome c oxidase subunit ii | PLIM_RS20515 | Not Available | + | 5119331 - 5120323 | 37147.8 |
| cytochrome c oxidase subunit i | PLIM_RS20520 | Q4ULU5 | + | 5120397 - 5122091 | 62346.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.