Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1501 domain-containing protein | PLIM_RS20420 | Not Available | + | 5094540 - 5095937 | 51191.3 |
| metallophosphoesterase | PLIM_RS20425 | O34986 | + | 5096130 - 5097203 | 39993.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | PLIM_RS20430 | Q7ULT2 | + | 5097544 - 5098467 | 34121.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PLIM_RS20435 | P54461 | + | 5098525 - 5099280 | 27815.5 |
| hypothetical protein | PLIM_RS20440 | Not Available | + | 5099310 - 5099507 | 7199.04 |
| hypothetical protein | PLIM_RS20445 | Not Available | + | 5099515 - 5100024 | 18220.2 |
| tetratricopeptide repeat protein | PLIM_RS20450 | Not Available | + | 5100303 - 5102453 | 74951.8 |
| lysophospholipid acyltransferase family protein | PLIM_RS20455 | Not Available | + | 5102513 - 5103274 | 28163.1 |
| hypothetical protein | PLIM_RS20460 | Not Available | + | 5103345 - 5104013 | 25928.6 |
| glycogen debranching protein glgx | PLIM_RS20465 | P0A4Y5 | - | 5104183 - 5106321 | 80435.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.