Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS25110 | Not Available | - | 5085357 - 5086424 | 40440.6 |
| phage terminase small subunit p27 family | PLIM_RS25115 | Not Available | + | 5086455 - 5086925 | 17681.3 |
| stm4504/cby_0614 family protein | PLIM_RS20370 | Not Available | + | 5086997 - 5087902 | 34038.8 |
| rna polymerase sigma factor | PLIM_RS20380 | Not Available | + | 5088290 - 5089171 | 33554.1 |
| glucose 1-dehydrogenase | PLIM_RS20385 | Q49117 | + | 5089238 - 5089993 | 25393.6 |
| duf1330 domain-containing protein | PLIM_RS20390 | Not Available | + | 5090028 - 5090315 | 10650.7 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | PLIM_RS20395 | Not Available | + | 5090511 - 5090924 | 15231.8 |
| helix-hairpin-helix domain-containing protein | PLIM_RS20400 | Not Available | + | 5091096 - 5091350 | 9622.63 |
| gnat family n-acetyltransferase | PLIM_RS20405 | C7IZ16 | - | 5091386 - 5091847 | 16971.7 |
| duf1549 and duf1553 domain-containing protein | PLIM_RS20415 | Not Available | + | 5092175 - 5094454 | 85949.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.