Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | PLIM_RS20305 | P14375 | + | 5076065 - 5077549 | 54547.4 |
| flagellar basal body rod protein flgb | PLIM_RS20310 | Not Available | + | 5077707 - 5078183 | 17597.7 |
| flagellar basal body rod protein flgc | PLIM_RS20315 | P57420 | + | 5078190 - 5078603 | 14840.7 |
| flagellar hook-basal body complex protein flie | PLIM_RS20320 | Not Available | + | 5078745 - 5079080 | 12079.4 |
| vanz family protein | PLIM_RS23360 | Not Available | + | 5079087 - 5079587 | 19535.2 |
| carboxypeptidase-like regulatory domain-containing protein | PLIM_RS20330 | Not Available | + | 5080024 - 5080554 | 17630.9 |
| pilz domain-containing protein | PLIM_RS20335 | Not Available | - | 5080659 - 5081504 | 31045.0 |
| glycosyltransferase family 39 protein | PLIM_RS20345 | Not Available | + | 5082030 - 5083790 | 64620.4 |
| Trna-pro | Not Available | Not Available | + | 5083939 - 5084013 | Not Available |
| hypothetical protein | PLIM_RS20355 | Not Available | - | 5084515 - 5085249 | 27861.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.