Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1559 domain-containing protein | PLIM_RS23335 | Not Available | - | 5052164 - 5052817 | 24419.6 |
| duf4375 domain-containing protein | PLIM_RS20210 | Not Available | - | 5052990 - 5053535 | 20385.0 |
| voc family protein | PLIM_RS25100 | Not Available | - | 5053654 - 5054094 | 15963.1 |
| Trna-ser | Not Available | Not Available | + | 5054312 - 5054398 | Not Available |
| hypothetical protein | PLIM_RS20225 | Not Available | - | 5054497 - 5054739 | 8760.53 |
| hypothetical protein | PLIM_RS20230 | Not Available | + | 5055512 - 5055820 | 10883.8 |
| 50s ribosomal protein bl37 | PLIM_RS25105 | Not Available | - | 5056033 - 5056131 | 3560.43 |
| hypothetical protein | PLIM_RS20235 | Not Available | + | 5056372 - 5057364 | 35684.1 |
| hypothetical protein | PLIM_RS20240 | Not Available | + | 5057452 - 5060982 | 134027.0 |
| tylf/mycf family methyltransferase | PLIM_RS20245 | Q9AJU0 | - | 5060958 - 5061863 | 34020.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.