Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | PLIM_RS20155 | Not Available | - | 5040580 - 5041071 | 17680.6 |
| gfo/idh/moca family protein | PLIM_RS20160 | Not Available | - | 5041216 - 5042514 | 48180.1 |
| glycosyltransferase family 2 protein | PLIM_RS20165 | Q4L977 | - | 5042672 - 5043811 | 42273.8 |
| fic family protein | PLIM_RS20170 | Q23544 | - | 5043871 - 5045373 | 57582.8 |
| hypothetical protein | PLIM_RS20175 | Not Available | - | 5045399 - 5045713 | 11647.8 |
| smp-30/gluconolactonase/lre family protein | PLIM_RS20180 | Q01578 | - | 5045713 - 5046768 | 38237.8 |
| vcbs repeat-containing protein | PLIM_RS20185 | Not Available | - | 5046806 - 5048029 | 44588.6 |
| class i sam-dependent rrna methyltransferase | PLIM_RS20190 | Q9RYA1 | - | 5048187 - 5049464 | 47412.5 |
| sulfite oxidase | PLIM_RS20195 | P07850 | + | 5050060 - 5051283 | 44648.4 |
| dual specificity protein phosphatase | PLIM_RS20200 | Not Available | - | 5051363 - 5051785 | 15255.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.