Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | PLIM_RS20050 | Q7UIE1 | - | 5013523 - 5014602 | 38242.4 |
| hypothetical protein | PLIM_RS24265 | Not Available | - | 5014942 - 5015151 | 7486.01 |
| hypothetical protein | PLIM_RS20055 | Not Available | + | 5015304 - 5017022 | 61746.6 |
| putative ig domain-containing protein | PLIM_RS20060 | Not Available | + | 5017019 - 5018815 | 65419.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PLIM_RS20065 | Q1LJ80 | - | 5019220 - 5019795 | 20618.8 |
| xylose operon transcription regulator xylr | PLIM_RS20070 | Not Available | - | 5020019 - 5021248 | 45819.5 |
| duf1559 domain-containing protein | PLIM_RS20075 | Not Available | + | 5021523 - 5022545 | 36438.0 |
| hypothetical protein | PLIM_RS20080 | Not Available | - | 5022668 - 5023144 | 17782.0 |
| cell division protein ftsq/divib | PLIM_RS20085 | Not Available | - | 5023271 - 5024269 | 36993.2 |
| duf2617 family protein | PLIM_RS20095 | Not Available | + | 5024693 - 5025265 | 21043.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.