Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS19930 | Not Available | - | 4985265 - 4986578 | 48697.5 |
| glycosyltransferase | PLIM_RS19940 | Not Available | - | 4986867 - 4988048 | 43928.9 |
| glycosyltransferase | PLIM_RS19945 | Not Available | - | 4988045 - 4989613 | 57177.6 |
| polysaccharide deacetylase family protein | PLIM_RS23310 | O34798 | - | 4989672 - 4990541 | 32954.4 |
| glycosyltransferase | PLIM_RS23315 | O32272 | - | 4990538 - 4991905 | 50057.8 |
| gnat family n-acetyltransferase | PLIM_RS19960 | Not Available | - | 4992037 - 4993383 | 50644.8 |
| phenylacetate--coa ligase family protein | PLIM_RS19965 | Not Available | - | 4993371 - 4994813 | 54556.6 |
| glycosyltransferase | PLIM_RS19970 | Q46638 | - | 4994879 - 4996165 | 47552.9 |
| gnat family n-acetyltransferase | PLIM_RS19975 | Not Available | - | 4996162 - 4997424 | 47820.5 |
| o-antigen ligase | PLIM_RS19980 | Not Available | - | 4997457 - 4998788 | 48093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.