Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit j | PLIM_RS19875 | Q56225 | + | 4971503 - 4972222 | 25092.2 |
| nadh-quinone oxidoreductase subunit nuok | PLIM_RS19880 | B7J7T5 | + | 4972219 - 4972695 | 16886.8 |
| nadh-quinone oxidoreductase subunit l | PLIM_RS19885 | P9WIW0 | + | 4972925 - 4975015 | 74058.7 |
| nuom family protein | PLIM_RS19890 | P50974 | + | 4975109 - 4976908 | 63997.2 |
| nadh-quinone oxidoreductase subunit n | PLIM_RS19895 | B3E9V6 | + | 4976905 - 4978413 | 54091.4 |
| dabb family protein | PLIM_RS19900 | Not Available | + | 4978492 - 4978803 | 11788.0 |
| hdod domain-containing protein | PLIM_RS19905 | Not Available | - | 4979192 - 4980157 | 35600.0 |
| hdod domain-containing protein | PLIM_RS19910 | Not Available | - | 4980169 - 4981119 | 34307.0 |
| polysaccharide biosynthesis tyrosine autokinase | PLIM_RS19915 | Not Available | - | 4981312 - 4983648 | 86770.2 |
| endonuclease/exonuclease/phosphatase family protein | PLIM_RS19920 | Not Available | - | 4983758 - 4984933 | 43727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.