Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | PLIM_RS19825 | A1TLL6 | + | 4962211 - 4962588 | 13942.4 |
| nadh-quinone oxidoreductase subunit b | PLIM_RS19830 | B3QUS2 | + | 4962579 - 4963271 | 24843.4 |
| nadh-quinone oxidoreductase subunit c | PLIM_RS19835 | B3E9W7 | + | 4963409 - 4963897 | 18675.2 |
| nadh dehydrogenase (quinone) subunit d | PLIM_RS19840 | B3DXN7 | + | 4964001 - 4965263 | 46915.5 |
| nad(p)h-dependent oxidoreductase subunit e | PLIM_RS19845 | Q9I0J8 | + | 4965260 - 4965739 | 17746.3 |
| hypothetical protein | PLIM_RS19850 | Not Available | + | 4965911 - 4966165 | 9970.69 |
| nadh-quinone oxidoreductase subunit nuof | PLIM_RS19855 | P56913 | + | 4966222 - 4967553 | 48153.9 |
| molybdopterin-dependent oxidoreductase | PLIM_RS19860 | Q4UK22 | + | 4967654 - 4969363 | 61695.3 |
| nadh-quinone oxidoreductase subunit nuoh | PLIM_RS19865 | Q11VB9 | + | 4969360 - 4970532 | 42848.2 |
| nadh-quinone oxidoreductase subunit i | PLIM_RS19870 | A0RMD6 | + | 4970615 - 4971283 | 25107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.