Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospholipid scramblase-related protein | PLIM_RS19775 | Not Available | + | 4940819 - 4941415 | 22066.8 |
| hypothetical protein | PLIM_RS24900 | Not Available | + | 4941722 - 4941847 | 4563.27 |
| right-handed parallel beta-helix repeat-containing protein | PLIM_RS19780 | Not Available | - | 4942118 - 4946806 | 161197.0 |
| endo-1,4-beta-xylanase | PLIM_RS19785 | Not Available | - | 4947182 - 4948654 | 54858.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | PLIM_RS19790 | Q7UJ19 | + | 4949004 - 4949918 | 34143.8 |
| sensor histidine kinase | PLIM_RS19795 | P14377 | + | 4950015 - 4951466 | 53850.3 |
| lysylphosphatidylglycerol synthase domain-containing protein | PLIM_RS19800 | Not Available | + | 4951863 - 4952894 | 37649.9 |
| hypothetical protein | PLIM_RS19805 | Not Available | - | 4952839 - 4955016 | 80080.6 |
| pqq-binding-like beta-propeller repeat protein | PLIM_RS19810 | Not Available | - | 4955482 - 4960368 | 181779.0 |
| phosphoribosylformylglycinamidine synthase subunit purq | PLIM_RS19815 | Q3Z9H5 | - | 4960743 - 4961612 | 31620.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.