Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PLIM_RS19625 | Not Available | - | 4901273 - 4902106 | 32173.4 |
| mate family efflux transporter | PLIM_RS19630 | Not Available | - | 4902195 - 4903703 | 53865.3 |
| duf1553 domain-containing protein | PLIM_RS19635 | Not Available | + | 4904094 - 4906964 | 105131.0 |
| duf1501 domain-containing protein | PLIM_RS19640 | Not Available | + | 4907048 - 4908448 | 50843.3 |
| gfo/idh/moca family protein | PLIM_RS19645 | Not Available | - | 4908657 - 4909985 | 49105.0 |
| gfo/idh/moca family protein | PLIM_RS19650 | Not Available | + | 4910205 - 4911593 | 51407.5 |
| fatty acid desaturase | PLIM_RS19655 | Q949X0 | - | 4911724 - 4912884 | 43573.9 |
| response regulator transcription factor | PLIM_RS19660 | O07130 | - | 4913002 - 4913796 | 29665.5 |
| sensor histidine kinase kdpd | PLIM_RS19665 | A0R3I7 | - | 4913793 - 4914761 | 36401.7 |
| diguanylate cyclase | PLIM_RS19670 | Q57N14 | + | 4915197 - 4917383 | 81270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.