Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Planctomycetia
Order
Planctomycetales
Family
Planctomycetaceae
Genus
Planctopirus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Planctomycetia |
| Order | Planctomycetales |
| Family | Planctomycetaceae |
| Genus | Planctopirus |
| Species | Planctopirus limnophila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Planctopirus limnophila DSM 3776
Accession NumberNC_014149.1
Gene Summary
Adenine Count
8422 bp
Thymine Count
7481 bp
Guanine Count
10628 bp
Cytosine Count
10479 bp
Genome Length
37010 bp
Protein-coding Genes
48 genes
Non-Coding Genes
8 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | PLIM_RS19565 | E1V931 | + | 4888705 - 4889805 | 39038.4 |
| biopolymer transporter exbd | PLIM_RS19570 | Not Available | - | 4890147 - 4890605 | 16728.4 |
| biopolymer transporter exbd | PLIM_RS19575 | Not Available | - | 4890724 - 4891203 | 17938.8 |
| mota/tolq/exbb proton channel family protein | PLIM_RS23295 | Not Available | - | 4891319 - 4892221 | 31651.7 |
| lipopolysaccharide assembly protein lapb | PLIM_RS19585 | Not Available | - | 4892616 - 4893701 | 38738.6 |
| hypothetical protein | PLIM_RS19590 | Not Available | - | 4893873 - 4897493 | 132092.0 |
| anti-sigma factor | PLIM_RS19600 | Not Available | - | 4897929 - 4898174 | 8873.6 |
| sigma-70 family rna polymerase sigma factor | PLIM_RS19605 | Not Available | - | 4898171 - 4898773 | 23857.4 |
| rrf2 family transcriptional regulator | PLIM_RS19610 | Not Available | - | 4898867 - 4899310 | 15630.1 |
| no-inducible flavohemoprotein | PLIM_RS19615 | Q7UIY1 | + | 4899485 - 4900771 | 47423.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.